Brain tissue segmentation of fetal MR images

نویسندگان

  • M. Bach Cuadra
  • M. Schaer
  • A. André
  • L. Guibaud
  • S. Eliez
چکیده

We present a segmentation method for fetal brain tissues of T2w MR images, based on the well known Expectation Maximization Markov Random Field (EM-MRF) scheme. Our main contribution is an intensity model composed of 7 Gaussian distribution designed to deal with the large intensity variability of fetal brain tissues. The second main contribution is a 3-steps MRF model that introduces both local spatial and anatomical priors given by a cortical distance map. Preliminary results on 4 subjects are presented and evaluated in comparison to manual segmentations showing that our methodology can successfully be applied to such data, dealing with large intensity variability within brain tissues and partial volume (PV).

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Quantitative Comparison of SPM, FSL, and Brainsuite for Brain MR Image Segmentation

Background: Accurate brain tissue segmentation from magnetic resonance (MR) images is an important step in analysis of cerebral images. There are software packages which are used for brain segmentation. These packages usually contain a set of skull stripping, intensity non-uniformity (bias) correction and segmentation routines. Thus, assessment of the quality of the segmented gray matter (GM), ...

متن کامل

Comparison of state-of-the-art atlas-based bone segmentation approaches from brain MR images for MR-only radiation planning and PET/MR attenuation correction

Introduction: Magnetic Resonance (MR) imaging has emerged as a valuable tool in radiation treatment (RT) planning as well as Positron Emission Tomography (PET) imaging owing to its superior soft-tissue contrast. Due to the fact that there is no direct transformation from voxel intensity in MR images into electron density, itchr('39')s crucial to generate a pseudo-CT (Computed Tomography) image ...

متن کامل

An Automated MR Image Segmentation System Using Multi-layer Perceptron Neural Network

Background: Brain tissue segmentation for delineation of 3D anatomical structures from magnetic resonance (MR) images can be used for neuro-degenerative disorders, characterizing morphological differences between subjects based on volumetric analysis of gray matter (GM), white matter (WM) and cerebrospinal fluid (CSF), but only if the obtained segmentation results are correct. Due to image arti...

متن کامل

Comparison the Accuracy of Fetal Brain Extraction from T2-Half-Fourier Acquisition Single-Shot Turbo Spin-Echo (HASTE) MR Image with T2-True Fast Imaging with Steady State Free Precession (TRUFI) MR Image by Level Set Algorithm

Background Access to appropriate images of fetal brain can greatly assist to diagnose of probable abnormalities. The aim of this study was to compare the suitability of T2-True Fast Imaging with Steady State Free Precession (T2-TRUFI), and T2-Half-Fourier Acquisition Single-Shot Turbo Spin-Echo (T2- HASTE( magnetic resonance imaging (MRI) to extract the fetal brain using the level set algorithm...

متن کامل

A hierarchical Convolutional Neural Network for Segmentation of Stroke Lesion in 3D Brain MRI

Introduction: Brain tumors such as glioma are among the most aggressive lesions, which result in a very short life expectancy in patients. Image segmentation is highly essential in medical image analysis with applications, particularly in clinical practices to treat brain tumors. Accurate segmentation of magnetic resonance data is crucial for diagnostic purposes, planning surgical treatments, a...

متن کامل

Automatic Segmentation of the Intracranial Volume in Fetal MR Images

MR images of the fetus allow non-invasive analysis of the fetal brain. Quantitative analysis of fetal brain development requires automatic brain tissue segmentation that is typically preceded by segmentation of the intracranial volume (ICV). This is challenging because fetal MR images visualize the whole moving fetus and in addition partially visualize the maternal body. This paper presents an ...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2009